Li Y, Li H, Fan Y ACEnet: Anatomical Context-Encoding Network for Neuroanatomy Segmentation , Med Image Anal, 70(101991): 2021,1-12

Li H, Fan Y MDReg-Net: Multi-resolution diffeomorphic image registration using fully convolutional networks with deep self-supervision , Hum Brain Mapp, 43(7): 2022,2218-2231

Jiao Z, Li H, Xiao Y, Aggarwal C, Galperin-Aizenberg M, Pryma D, Simone CB 2nd, Feigenberg SJ, Kao GD, Fan Y Integration of Risk Survival Measures Estimated From Pre- and Posttreatment Computed Tomography Scans Improves Stratification of Patients With Early-Stage Non-small Cell Lung Cancer Treated With Stereotactic Body Radiation Therapy , Int J Radiat Oncol Biol Phys, 109(5): 2021,1647-1656

Yin S, Peng Q, Li H, Zhang Z, You X, Fischer K, Furth SL, Fan Y, Tasian GE Multi-instance Deep Learning of Ultrasound Imaging Data for Pattern Classification of Congenital Abnormalities of the Kidney and Urinary Tract in Children , Urology, 142: 2020,183-189

Zheng Q, Itkin M, Fan Y Quantification of Thoracic Lymphatic Flow Patterns Using Dynamic Contrast-enhanced MR Lymphangiography , Radiology, 296(1): 2020,202-207

Liu H, Li H, Habes M, Li Y, Boimel P, Janopaul-Naylor J, Xiao Y, Ben-Josef E, Fan Y Robust Collaborative Clustering of Subjects and Radiomic Features for Cancer Prognosis , IEEE Trans Biomed Eng, 67(10): 2020,2735-2744

Smith AL, Weissbart SJ, Hartigan SM, Bilello M, Newman DK, Wein AJ, Malykhina AP, Erus G, Fan Y Association between urinary symptom severity and white matter plaque distribution in women with multiple sclerosis , Neurourol Urodyn, 39(1): 2020,339-346

Li H, Fan Y Interpretable, highly accurate brain decoding of subtly distinct brain states from functional MRI using intrinsic functional networks and long short-term memory recurrent neural networks , Neuroimage, 202(116059): 2019,1-11

Yin S, Peng Q, Li H, Zhang Z, You X, Fischer K, Furth SL, Tasian GE, Fan Y Automatic kidney segmentation in ultrasound images using subsequent boundary distance regression and pixelwise classification networks , Med Image Anal, 60(101602): 2020,1-14

Jing R, Li P, Ding Z, Lin X, Zhao R, Shi L, Yan H, Liao J, Zhuo C, Lu L, Fan Y Machine learning identifies unaffected first-degree relatives with functional network patterns and cognitive impairment similar to those of schizophrenia patients , Hum Brain Mapp, 40(13): 2019,3930-3939