Silvia Wu, Nicholas Tedrow, Abhinav Bhalla, Alex Devito, Sheavonnie Wright, Friederike Selbach, Darshana M. Dadhania, Carol Li, Vesh Srivatana, Jeffrey Silberzweig, John R. Lee A Staphylococcus Dominant Nasal Microbiota in Hemodialysis Patients , Kidney Medicine, 7(10): 2025
Shuai Li, Runzhe Li, John R Lee, Ni Zhao, Wodan Ling ZINQ-L: a zero-inflated quantile approach for differential abundance analysis of longitudinal microbiome data
, Frontiers in genetics, 1(5): 2025,1494401
Mark B Lockwood, Choa Sung, Suzanne A Alvernaz, John R Lee, Jennifer L Chin, Mehdi Nayebpour, Beatriz Peñalver Bernabé, Lisa M Tussing-Humphreys, Hongjin Li, Mario Spaggiari, Alessandro Martinino, Chang G Park, George E Chlipala, Ardith Z Doorenbos, Stefan J Green The Gut Microbiome and Symptom Burden After Kidney Transplantation: An Overview and Research Opportunities
, Biological research for nursing, 26(4): 2024,636-656
Ying Li, Teresa Lee, Kai Marin, Xing Hua, Sujatha Srinivasan, David N Fredricks, John R Lee, Wodan Ling SurvBal: compositional microbiome balances for survival outcomes
, Bioinformatics (Oxford, England)
, 40(140): 2024,btae612
Hanbo Dong, Runzhe Li, Ni Zhao, Darshana M Dadhania, Manikkam Suthanthiran, John R Lee, Wodan Ling Antibiotic subclasses differentially perturb the gut microbiota in kidney transplant recipients
, Frontiers in Transplant: 2024,1400067
Amal Naji, Drew Siskin, Michael H Woodworth, John R Lee, Colleen S Kraft, Nirja Mehta The Role of the Gut, Urine, and Vaginal Microbiomes in the Pathogenesis of Urinary Tract Infection in Women and Consideration of Microbiome Therapeutics
, Open forum infectious diseases, 11(9): 2024,471
Meredith Aull, Pauline Paton, Perry, Jennifer Lee, John R Lee, Thalia Salinas, Deirdre Sawinski, Jun B Lee, Choli Hartono, Muthukumar Thangamani, Sandip Kapur, Manikkam Suthanthiran, Darshana Dadhania How Low Can you Go with Rabbit Anti-Thymocyte Globulin Induction Therapy , American Journal of Transplantation, 24(6): 2024,S918
Carol Li, Darshana Dadhania, Manikkam Suthanthiran, John R Lee Gut Microbial Derived Fecal Short Chain Fatty Acid Abundance Correlates with Urinary Tract Infection in Kidney Transplant Recipients , American Journal of Transplantation , 24(6): 2024,S942
Liz-Audrey Kounatse Djomnang, Carol Li, Omary Mzava, Alexandre Pellan Cheng, Adrienne Chang, Joan Sesing Lenz, Manikkam Suthanthiran, John R Lee, Darshana M Dadhania, Iwijn De Vlaminck A quantitative comparison of urine centrifugation and filtration for the isolation and analysis of urinary nucleic acid biomarkers
, Scientific Reports, 14(14): 2024,10872
Sylvia Wu, Nicholas Tedrow, Abhinav Bhalla, Alex Devito, Sheavonnie Wright, Carol Li, Darshania Dadhania, Vesh Srivatana, Jeffrey Silberzweig. John R Lee A Distinct Nasal Microbiota in Hemodialysis Patients: A Pilot Study , American Journal of Kidney Disease , 83(4): 2024,S84