Monica Wei, Matthew J. Ziegler, Pam Tolomeo, Laura Cowden, Brendan J. Kelly k-mer sketch profiles identify suspected multidrug-resistant organism transmission events , European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Global 2026 (Munich, Germany): 2026
Lucky CW, Medernach RL, Kelly BJ, Kwon JH, Woodworth MH. Microbiome Therapeutics for Clostridioides difficile Infection , Infect Dis Clin North Am, 39(4): 2025,663-683
Ziegler MJ, Anesi J, Tolomeo P, Glaser L, Cowden L, Cressman L, Huang E, Patel A, Lautenbach E, Pegues DA, Kelly BJ. Screening and targeted prophylaxis for Clostridioides difficile infection , Clin Microbiol Infect, 31(11): 2025,1907-1913
Laurel Redding, Scott G. Daniel, Joseph D. Zackular, Maho Okumura, Stephen D. Cole, Kyle Bittinger, Brendan J. Kelly Amplicon-Based Sequencing is Able to Accurately Detect Clostridioides Difficile , SSRN [preprint]: 2025
Ziegler MJ, Loughrey S, Bekele S, Huang E, Tolomeo P, David MZ, Lautenbach E, Glaser LJ, Kelly BJ. Comparative performance of sponge versus flocked swabs for culture-based and metagenomic detection of microbial contamination in the healthcare environment , Infect Control Hosp Epidemiol, 46(8): 2025,1-7
Sherrie Xie, Leigh Cressman, Matthew J. Ziegler, Brendan J. Kelly Impact of time post-hospitalization on carbapenem-resistance among Enterobacterales infections , European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Global 2025 (Vienna, Austria): 2025
Alyssa Mezochow, Emilia Wilkins, Leigh Cressman, Brendan J. Kelly Lung pathogens persist in the gut microbiome during critical illness , European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Global 2025 (Vienna, Austria): 2025
Kelly BJ, Kwon JH, Woodworth MH. Reply to Olle et al , J Infect Dis, 231(2): 2025,545
Ziegler MJ, Anesi J, Tolomeo P, Glaser L, Cowden C, Cressman L, Huang E, Patel A, Lautenbach E, Kelly BJ Screening and targeted prophylaxis for Clostridioides difficile infection: STOP-CDI. , Infectious Diseases Society of America, IDWeek. Oral Presentation; 2024 Oct; Los Angeles, CA.: 2024
Kelly BJ, Kwon JH, Woodworth MH. Escape Velocity-the Launch of Microbiome Therapies , J Infect Dis, 230(30): 2024,2-4